# Conda

#### Conda install required packages for Python env

```
conda install conda-forge::pytorch=2.6.0 python=3.12 scikit-learn \
transformers pandas matplotlib notebook seaborn
```

#### Conda install required packages for R env

<pre><code>conda install conda-forge::r-seurat bioconda::bioconductor-rsamtools \
bioconductor-complexheatmap
<strong>conda install conda-forge::r-rpart r-rpart.plot r-randomforest \
</strong>r-proc r-ggpubr r-glmnet r-caret r-forcats r-rstatix r-prroc r-xgboost r-ggprism \
r-ggvenn r-see
</code></pre>

#### Conda prevent auto config

```bash
conda config --set auto_activate_base false
```

#### Google cloud gs protocol

```
https://console.cloud.google.com/storage/browser/
```

#### Change TMPDIR

```bash
export TMPDIR=$HOME/tmp/
```


---

# Agent Instructions: Querying This Documentation

If you need additional information that is not directly available in this page, you can query the documentation dynamically by asking a question.

Perform an HTTP GET request on the current page URL with the `ask` query parameter:

```
GET https://juechen-yang.gitbook.io/juechen-s-codebook/others.md?ask=<question>
```

The question should be specific, self-contained, and written in natural language.
The response will contain a direct answer to the question and relevant excerpts and sources from the documentation.

Use this mechanism when the answer is not explicitly present in the current page, you need clarification or additional context, or you want to retrieve related documentation sections.
